This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001CYZC.1

Display Name: Israel/LOC_001CYZC.1/2024-01-10
M. Weil

Sample details

Collection date
2024-01-10
Collection date (lower bound)
2024-01-10
Collection date (upper bound)
2024-01-10
Earliest release date
2024-06-19
Collection country
Israel
Isolate name
85

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-12-18 12:54insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Israel Ministry Of Health, ICDC

INSDC

NCBI release date
2024-06-19
NCBI update date
2024-06-19
INSDC accession

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics

Length
172
Total SNPs
27
Total inserted nucs
0
Total deleted nucs
0
Total ambiguous nucs
1
Total unknown nucs
0
Total frame shifts
0
Completeness
2.31%
Total stop codons
0

Submission details

Submission ID
PP887649.1
Submitting group
Date submitted
2025-12-18 12:54:03 UTC
Date released
2025-12-18 13:12:18 UTC

Clade

Clade EV-A71
C1-like

Genotype

Genotype
EV-A71

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • A2696G
  • A2699G
  • C2702G
  • A2705G
  • T2720C
  • T2723C
  • A2730G
  • C2738A
  • C2741A
  • T2744C
  • G2747A
  • G2753T
  • C2759T
  • C2780T
  • T2786C
  • G2792A
  • C2798G
  • A2801G
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions

    VP1

  • VP1:K98E
    • Deletions
    None
    Insertions
    None

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